Journal: STAR protocols
Article Title: Protocol for immunofluorescence detection and quantification of phosphorylated SMAD proteins in human blastocysts.
doi: 10.1016/j.xpro.2025.103849
Figure Lengend Snippet: Figure 4. Manual validation of nuclei with high DAPI-normalized fluorescence intensity (A) Nuclear staining (DAPI) in a hatching human blastocyst (left), the resulting tracked objects (middle) and the overlay onto the original microscopy data (right), to illustrate the fidelity of nuclear segmentation and tracking. (B) Immunohistochemistry detection of NANOG and phospho-SMAD2 expression in the same Z-plane displayed in (A) and overlaid with the tracked nuclei (bottom row). (C) DAPI-normalized phospho-SMAD2 immunofluorescence intensity of nuclei highlighted in and, in (A) and (B). Nuclei 38, 53, and 29 (green) had confirmed phospho-SMAD2 expression, while nucleus 45 (gray) does not display phospho-SMAD2 expression. (D) Bee swarm plot of NANOG and phospho-SMAD2 fluorescence intensity of all nuclei in one analyzed human blastocyst, either raw or DAPI-normalized. Error bars indicate mean +/- SEM. Highlighted are nuclei with manually validated expression of NANOG (red) or phospho-SMAD2 (green). DAPI normalization results in a reduction of false- positive phospho-SMAD2-expressing nuclei amongst the tracked object with highest normalized phospho-SMAD2 immunofluorescence intensity.
Article Snippet: Furthermore, both antibodies for detection of phosphorylated SMAD2 and SMAD1/5 (Cell Signaling Technology, Cat# 18338 and Cat# B5B10, respectively) were raised in rabbit and cannot be combined in one analysis.
Techniques: Biomarker Discovery, Fluorescence, Staining, Microscopy, Immunohistochemistry, Expressing, Immunofluorescence